Overview
Thermo Scientific FastDigest enzymes are an advanced line of restriction enzymes that create a new standard in DNA digestion. During our 30 years of restriction enzyme research, we compiled one of the largest collections of restriction enzyme producing bacterial strains in the industry. Our large section of enzyme isoschizomers and state-of-the-art production facility facilitated the creation of the unique system of 176 FastDigest® restriction enzymes.
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Old Standard
Conventional restriction enzymes |
New Standard
FastDigest restriction enzymes |
| Buffer System |
Up to 20 Buffers |
One Universal Buffer |
| Double/Multiple Restriction Digestion |
Limited by buffer compatibility |
Any digestion combination possible |
| Reaction Time |
1 hour - overnight |
5 - 15 minutes |
| Direct Loading On Gels |
No |
Yes |
| Downstream Applications |
Partial compatibility |
100% buffer compatibility |
| Star Activity |
Yes |
No |
| Activity Definintion |
1 unit of enzyme hydrolyzes 1µg of lambda DNA in 60 minutes in an optimal buffer for an enzyme |
1µl of FastDigest enzyme cleaves1 µg of substrate DNA in 5 to 15 minutes in FastDigest buffer |
The Great Double Digestion Day
100% activity in the universal buffer
The 10X FastDigest Green Buffer is a proprietary digestion buffer which supports 100% activity of all FastDigest restriction enzymes.
Benefits:
- Double and multiple digestion in the universal buffer with any combination of enzymes.
- No sequential digestions or buffer changes needed.
- Allows direct loading of reaction mixture on gels.
- Saves pipetting time and eliminates the need for DNA loading dyes.
Five minute triple digestion of plasmid DNA followed by ligation in FastDigest and FastDigest Green buffers
- M:GeneRuler™ Express DNA Ladder (#SM1551)
- C:Undigested plasmid DNA control
- 1:Plasmid DNA triple digested with FastDigest EcoRI, FastDigest KpnI and FastDigest SmaI in FastDigest buffer
- 2:The digestion and ligation reaction mixture in FastDigest buffer
- 3:Plasmid triple digested with FastDigest EcoRI, FastDigest KpnI and FastDigest SmaI in FastDigest Green buffer
- 4:The digestion and ligation reaction mixture in FastDigest Green buffer
100% buffer compatibility with downstream applications
DNA modifying enzymes, such as Klenow Fragment, T4 DNA Ligase, alkaline phosphatases and T4 DNA Polymerase have 100% activity in FastDigest Green Buffer. Therefore, enzymes for downstream applications can be directly added to the FastDigest reaction mix.
| DNA/RNA modifying enzyme |
Activity in FastDigest Green Buffer/FastDigest Buffer |
| DNA Polymerase I, E.coli |
100% |
| Klenow Fragment |
100% |
| Klenow Fragment, exo |
100% |
| T4 DNA Polymerase |
100% |
| T7 DNA Polymerase |
100% |
| T4 DNA Ligase* |
75-100% |
| FastAP Thermosensitive Alkaline Phosphatase |
100% |
| Shrimp Alkaline Phosphatase |
100% |
| T4 Polynucleotide Kinase |
100% |
Direct loading on gels
The 10X FastDigest Green Buffer includes a density reagent and two tracking dyes for direct loading of digestion reaction products on gels. The blue dye migrates with 3-5 kb DNA fragments in a 1% agarose gel and has an excitation peak of 424 nm. The yellow dye migrates faster than 10 bp DNA fragments in a 1% agarose gel and has an excitation peak of 615 nm.

FastDigest Green Buffer
Reaction mixture containing FastDigest Green Buffer:
- Loaded into gel well, before electrophoresis
- Separated in a gel, after electrophoresis
No star activity
FastDigest enzymes are designed to eliminate "star" activity:
- Short incubation time (5-15 min), no need for prolonged digestions.
- Universal buffer with optimal pH and salt concentration for all enzymes.
- Optimal enzyme and glycerol concentrations.
Conventional restriction enzymes may display "star" or "relaxed" activity due to prolonged incubation times, high enzyme and/or glycerol concentration, high pH values or low ionic strength. By addressing all these issues, FastDigest enzymes enable single, double and even triple digestion in 5 minutes without any signs of "star" activity.
Five minute single and double digestion of plasmid DNA with no signs of "star" activity
- M:GeneRuler 1 kb Plus DNA Ladder
- C: Undigested plasmid DNA
- 1:Plasmid DNA digested in 5 min with FastDigest SmaI
- 2:Plasmid DNA digested in 5 min with FastDigest EcoRI
- 3:Plasmid DNA double digested in 5 min with FastDigest SmaI and FastDigest EcoRI
Complete digestion in 5-15 minutes
Double and multiple digestions in one buffer in 5-15 minutes:
- Saves time and effort, increasing throughput.
- Digestion times are provided for all types of DNA templates (plasmid DNA, PCR product, genomic DNA).
- No overnight digestions are required for any template.
- Star activity is eliminated due to short reaction times.
| Conventional restriction enzymes |
FastDigest restriction enzymes |
| Sequential digestion |
One reaction mixture |
| 1 |
Reaction setup for Apal |
~2 min |
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| 1 |
FastDigest Apal and FastDigest Xhol |
~2 min |
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| 3 |
Reaction setup for Xhol |
~2 min |
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| 5 |
Addition of Loading Dye |
1 min |
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176 FastDigest enzymes available
During 30 years of restriction enzyme search program we acquired one of the largest collections of restriction enzyme producing bacterial strains in the industry. Our wide selection of isoschizomers and ability to produce enzymes of exceptional purity enabled us to create the unique system of 176 FastDigest restriction enzymes formulated to have 100% activity in the universal buffer.
| 30 years of experience |
| >3000 restriction enzyme producing strains |
| >30% of all known enzymes discovered |
| >30% of all known enzymes cloned |
| 176 Thermo Scientific FastDigest Enzymes available |
| FastDigest Green Buffer included for direct loading on gels |